Installation

raccoon can be easily installed through python standard package managers without worrying about dependencies.

With pip

pip install raccoon-cluster

To install the latest (unreleased) version you can download it from our GitHub repository by running

git clone https://github.com/shlienlab/raccoon
cd raccoon
python setup.py install

The current version requires the following packages and their inherited dependencies:

  • scikit-learn

  • umap-learn

  • scikit-network

For a full list see requirements.txt